Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912835.1_cds_XP_016462919.1_56090
CDS Infomation

[gene=LOC107786003] [db_xref=GeneID:107786003] [protein=COMPASS-like H3K4 histone methylase component WDR5A] [protein_id=XP_016462919.1] [location=join(16137..16730,17731..18468)] [gbkey=CDS]
Sequence

ATGGCTTCAACAATGGACTTTGAGCCTCCAAATTCCCCTGCTTCAGCTCCATCTTTCGCC
ATAAGACCTAATCACAGCTTCTTGAGAAGTATTTCTACAAAAGAACCTTCTAATTTCTCC
GAAGATCTTCCCTATAGCCCACCTCGTTTAAGCACTTCAGTTCTCTCTTCCAATACATGC
CACCACAACTCTCAACCTTCAACTCCGCAACTTTCCTTCACGCTCGACAATCCAAAATTA
GCCGATGATCATCACTTTCAAACAACTTACAGGTGCATTTCATCAGTGTTAAAAAAAGAT
GGACAGATCTTGTCTGTTGCTACGTCAAATGGCCTCGTTTATACAGGGTCTCAGGCTAAT
GTAATACGTGTTTGGAAGTTGCCAGAGTTTACTGAATGTGATCATCTTAAGACGAGGGGG
TCTATGGTTGTTGCATTAAAAGTGTCAAATGATATGGTTTATGCTGCTTATGCGGATTGT
AAGATTCGGGTTTGGCGTAGGACTTGGGAAGGTGTTATCAAGCATGTTCGGGTTGCTAGT
ATTCCTAAGGTTGGAAGCTTTGTCCGGAGCTATATCTCTGGTCGAGATAAGATGATGAAG
CACATGGGACCAATATCATCACTGGCAATTAACATATCAGATGATATACTTTACTCAGCT
TCCCTTGATAAAACAGTAAAAGTATGGAGAATTTCTGATCTCAAATGCATAGAGACAATC
CAAGCCCATAACGATCCGATAAACGCCATTGTTGTTGGTGATGATGGTGTCCTCTATACT
GCTTCTGATGATGCCACAGTCCGAGTATGGCGACGTAATTTTTGTAGTGGAGATAGGCCA
CATTCCCTCACTGTGACATTACCAGCTAAATGTTCACCAGTAAAGACATTAGCATTAACA
ACTGATGGTGGGGTATTGTATGGTGGTTGCAGTGATGGTTACATTCATTATTGGATAAAA
GGTTGGTTTTCAGGGCAATTACAATATGGGGGTGCACTTCTTGGACACACACATGCTGTA
ATGTGCTTGTCCAGTACGGCTAACTATTTCATCAGTGGCTCTGCAGACTCAACGTGCAGA
GTCTGGTTTAGGGAGCAAGATTGTCAACATGTTTGCGTGGCGATCTTGCAAGGTCACAGA
GGACCGATTAGGTGCGTTACAGCTTTCCCAGGATGCGTGAATAATGAGGAGAGTGAAGAT
GGTTGCACCATTTGCACCGGAAGTCTTGATGGAGTTATCAAGATGTGGCGTGTGAGATGC
ACCAGCAGTAGCAGCGATAATACGGGCAAAGGTTCTTCACAGAATGCTTGTGATTATTTT
GAGATCGCTTAA

Peptide Sequence

PEP ID

XP_016462919.1
PEP Infomation

PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Nicotiana tabacum]
Sequence

MASTMDFEPPNSPASAPSFAIRPNHSFLRSISTKEPSNFSEDLPYSPPRLSTSVLSSNTC
HHNSQPSTPQLSFTLDNPKLADDHHFQTTYRCISSVLKKDGQILSVATSNGLVYTGSQAN
VIRVWKLPEFTECDHLKTRGSMVVALKVSNDMVYAAYADCKIRVWRRTWEGVIKHVRVAS
IPKVGSFVRSYISGRDKMMKHMGPISSLAINISDDILYSASLDKTVKVWRISDLKCIETI
QAHNDPINAIVVGDDGVLYTASDDATVRVWRRNFCSGDRPHSLTVTLPAKCSPVKTLALT
TDGGVLYGGCSDGYIHYWIKGWFSGQLQYGGALLGHTHAVMCLSSTANYFISGSADSTCR
VWFREQDCQHVCVAILQGHRGPIRCVTAFPGCVNNEESEDGCTICTGSLDGVIKMWRVRC
TSSSSDNTGKGSSQNACDYFEIA

Transcript Sequence

Gene sequence data has not been registered.